EnhancerDB
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  3. rs55877251[chr2:102324319]
Enhancers that have rs55877251[chr2:102324319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55877251[chr2:102324319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102324304 102324323 PAX5 JASPAR yes 75828713
chr2 102324313 102324334 IRF1 JASPAR yes 75828714
chr2 102324314 102324335 IRF1 JASPAR yes 75828715
chr2 102324318 102324333 FOXP1 JASPAR yes 75828716
chr2 102324318 102324339 IRF1 JASPAR yes 75828717
chr2 102324319 102324334 FOXP1 JASPAR yes 75828718
chr2 102324319 102324340 IRF1 JASPAR yes 75828719
Genes associated with rs55877251[chr2:102324319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More