EnhancerDB
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  3. rs55877886[chr1:226855071]
Enhancers that have rs55877886[chr1:226855071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55877886[chr1:226855071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226855058 226855079 ZNF263 JASPAR yes 35830024
chr1 226855059 226855080 IRF1 JASPAR yes 35830025
chr1 226855062 226855076 IRF8 JASPAR yes 35830026
chr1 226855063 226855077 SPI1 JASPAR yes 35830027
chr1 226855063 226855077 SPIC JASPAR yes 35830028
chr1 226855064 226855077 ELF1 JASPAR yes 35830029
chr1 226855066 226855077 ELF5 JASPAR yes 35830030
chr1 226855067 226855077 ETV6 JASPAR yes 35830031
chr1 226855067 226855077 GABPA JASPAR yes 35830032
chr1 226855069 226855075 ETS1 JASPAR yes 35830033
chr1 226855069 226855075 SPI1 JASPAR yes 35830034
Genes associated with rs55877886[chr1:226855071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More