EnhancerDB
  1. Home
  2. SNP
  3. rs558853138[chr1:19775486]
Enhancers that have rs558853138[chr1:19775486]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558853138[chr1:19775486]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19775477 19775495 TP63 JASPAR yes 27191754
chr1 19775478 19775492 ATF7 JASPAR yes 27191755
chr1 19775478 19775492 BATF3 JASPAR yes 27191756
chr1 19775478 19775492 CREB3 JASPAR yes 27191757
chr1 19775478 19775493 TP53 JASPAR yes 27191758
chr1 19775479 19775493 XBP1 JASPAR yes 27191759
chr1 19775480 19775490 MLX JASPAR yes 27191760
chr1 19775480 19775490 SREBF1 JASPAR yes 27191761
chr1 19775480 19775490 SREBF2 JASPAR yes 27191762
chr1 19775481 19775486 ATF1 TRANSFAC yes 27191763
Genes associated with rs558853138[chr1:19775486], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More