EnhancerDB
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  3. rs558947948[chr1:19718744]
Enhancers that have rs558947948[chr1:19718744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558947948[chr1:19718744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19718730 19718750 RREB1 JASPAR yes 27184489
chr1 19718733 19718752 RFX2 JASPAR yes 27184490
chr1 19718735 19718750 RFX5 JASPAR yes 27184491
Genes associated with rs558947948[chr1:19718744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More