EnhancerDB
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  3. rs558949340[chr12:125249660]
Enhancers that have rs558949340[chr12:125249660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558949340[chr12:125249660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125249374 125249676 ZNF274 GTRD no Cervix (HeLa-S3) 21582922
chr12 125249384 125249827 ZNF274 GTRD no Liver (HepG2) 21582923
chr12 125249402 125249825 ZNF274 GTRD no Liver (HepG2) 21582924
chr12 125249471 125249734 ZNF274 GTRD no Liver (HepG2) 21582925
Genes associated with rs558949340[chr12:125249660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More