EnhancerDB
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  3. rs558961873[chr1:173375401]
Enhancers that have rs558961873[chr1:173375401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs558961873[chr1:173375401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173374867 173375517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351245
chr1 173374907 173375423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351247
chr1 173374922 173375426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351248
chr1 173374979 173375455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351257
chr1 173374995 173375451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351260
chr1 173375104 173375402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351265
chr1 173375106 173375430 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351266
chr1 173375296 173375770 ZNF274 GTRD no Liver (HepG2) 21351268
chr1 173375391 173375405 E2F7 JASPAR yes 33195895
chr1 173375393 173375403 MZF1 JASPAR yes 33195896
Genes associated with rs558961873[chr1:173375401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More