EnhancerDB
  1. Home
  2. SNP
  3. rs55899514[chr1:1796728]
Enhancers that have rs55899514[chr1:1796728]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55899514[chr1:1796728]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1796707 1796728 IRF1 JASPAR yes 26208834
chr1 1796708 1796729 IRF1 JASPAR yes 26208835
chr1 1796709 1796729 RREB1 JASPAR yes 26208837
chr1 1796712 1796733 IRF1 JASPAR yes 26208840
chr1 1796714 1796734 RREB1 JASPAR yes 26208841
chr1 1796716 1796731 STAT2 JASPAR yes 26208842
chr1 1796718 1796739 IRF1 JASPAR yes 26208843
chr1 1796720 1796740 RREB1 JASPAR yes 26208844
chr1 1796721 1796735 ONECUT3 JASPAR yes 26208845
chr1 1796723 1796738 RUNX2 JASPAR yes 26208846
chr1 1796724 1796739 MEF2C JASPAR yes 26208847
chr1 1796725 1796745 RREB1 JASPAR yes 26208848
chr1 1796727 1796742 FOXP1 JASPAR yes 26208849
Genes associated with rs55899514[chr1:1796728], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More