EnhancerDB
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  3. rs559057374[chr1:225789252]
Enhancers that have rs559057374[chr1:225789252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559057374[chr1:225789252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225789247 225789257 ALX3 JASPAR yes 35753692
chr1 225789248 225789252 H1TF2 TRANSFAC yes 35753693
chr1 225789248 225789252 NFE TRANSFAC yes 35753694
chr1 225789248 225789252 SRF TRANSFAC yes 35753695
chr1 225789248 225789256 BSX JASPAR yes 35753696
chr1 225789248 225789256 DLX6 JASPAR yes 35753697
chr1 225789248 225789256 MSX1 JASPAR yes 35753698
chr1 225789248 225789256 MSX2 JASPAR yes 35753699
chr1 225789251 225789261 CEBPD JASPAR yes 35753700
chr1 225789251 225789262 CEBPA JASPAR yes 35753701
Genes associated with rs559057374[chr1:225789252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More