EnhancerDB
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  3. rs559071054[chr6:108909451]
Enhancers that have rs559071054[chr6:108909451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559071054[chr6:108909451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108909445 108909456 PHOX2A JASPAR yes 104180702
chr6 108909445 108909456 PROP1 JASPAR yes 104180703
chr6 108909447 108909468 IRF1 JASPAR yes 104180704
Genes associated with rs559071054[chr6:108909451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More