EnhancerDB
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  3. rs559093998[chr6:36636122]
Enhancers that have rs559093998[chr6:36636122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559093998[chr6:36636122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36636101 36636122 IRF1 JASPAR yes 101356918
chr6 36636115 36636130 RUNX2 JASPAR yes 101356921
chr6 36636118 36636124 SOX10 JASPAR yes 101356922
Genes associated with rs559093998[chr6:36636122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More