EnhancerDB
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  3. rs559105328[chr6:16344990]
Enhancers that have rs559105328[chr6:16344990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559105328[chr6:16344990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16344974 16344992 NR3C1 JASPAR yes 100290177
chr6 16344978 16344991 NR2F1 JASPAR yes 100290178
chr6 16344979 16344997 RARA JASPAR yes 100290179
chr6 16344982 16344995 SCRT2 JASPAR yes 100290181
chr6 16344983 16344998 LEF1 JASPAR yes 100290182
Genes associated with rs559105328[chr6:16344990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More