EnhancerDB
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  3. rs559114460[chr1:24602612]
Enhancers that have rs559114460[chr1:24602612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559114460[chr1:24602612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24602609 24602624 ESR2 JASPAR yes 27494345
chr1 24602612 24602622 HOXC10 JASPAR yes 27494346
chr1 24602612 24602622 HOXD11 JASPAR yes 27494347
chr1 24602612 24602622 HOXD13 JASPAR yes 27494348
chr1 24602612 24602623 HOXA10 JASPAR yes 27494349
chr1 24602612 24602623 HOXC11 JASPAR yes 27494350
chr1 24602612 24602623 HOXC12 JASPAR yes 27494351
chr1 24602612 24602623 HOXD12 JASPAR yes 27494352
Genes associated with rs559114460[chr1:24602612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More