EnhancerDB
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  3. rs559151936[chr2:232555360]
Enhancers that have rs559151936[chr2:232555360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559151936[chr2:232555360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232555345 232555366 IRF1 JASPAR yes 81737143
chr2 232555347 232555362 STAT2 JASPAR yes 81737144
chr2 232555348 232555362 STAT1 JASPAR yes 81737145
chr2 232555349 232555370 IRF1 JASPAR yes 81737146
chr2 232555350 232555365 FOXP1 JASPAR yes 81737147
chr2 232555350 232555371 IRF1 JASPAR yes 81737148
chr2 232555354 232555375 IRF1 JASPAR yes 81737149
chr2 232555355 232555370 FOXP1 JASPAR yes 81737150
chr2 232555355 232555376 IRF1 JASPAR yes 81737151
chr2 232555356 232555377 IRF1 JASPAR yes 81737152
chr2 232555357 232555372 FOXP1 JASPAR yes 81737153
chr2 232555357 232555378 IRF1 JASPAR yes 81737154
chr2 232555358 232555379 IRF1 JASPAR yes 81737155
chr2 232555359 232555374 FOXP1 JASPAR yes 81737156
chr2 232555360 232555375 FOXP1 JASPAR yes 81737157
Genes associated with rs559151936[chr2:232555360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More