EnhancerDB
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  3. rs55919035[chr6:43998377]
Enhancers that have rs55919035[chr6:43998377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55919035[chr6:43998377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43998369 43998379 NKX2-3 JASPAR yes 101814845
chr6 43998370 43998379 NKX2-8 JASPAR yes 101814846
Genes associated with rs55919035[chr6:43998377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 43139037 43149243 + SRF ENSG00000112658.6 43139037 849134 Ovary 0.284935 6606