EnhancerDB
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  3. rs559198536[chr17:46063448]
Enhancers that have rs559198536[chr17:46063448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559198536[chr17:46063448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46062662 46064863 AR GTRD no Prostate (PC-3) 21767277
chr17 46062845 46063619 ZBTB33 GTRD no Brain (SK-N-SH) 21767278
chr17 46062963 46063975 ZBTB33 GTRD no Brain (SK-N-SH) 21767279
chr17 46062980 46063702 ZNF143 GTRD no Epithelial (MCF-7) 21767280
chr17 46062997 46063816 ZBTB33 GTRD no Brain (SK-N-SH) 21767281
chr17 46063005 46064137 ZBTB33 GTRD no Brain (SK-N-SH) 21767282
chr17 46063011 46064018 ZBTB33 GTRD no Brain (SK-N-SH) 21767283
chr17 46063012 46063749 ZBTB33 GTRD no Brain (SK-N-SH) 21767284
chr17 46063020 46063614 ZNF143 GTRD no Epithelial (MCF-7) 21767285
chr17 46063023 46063874 ZNF274 GTRD no Cervix (HeLa-S3) 21767286
chr17 46063028 46063737 ZBTB33 GTRD no Brain (SK-N-SH) 21767287
chr17 46063041 46063638 ZBTB33 GTRD no Brain (SK-N-SH) 21767288
chr17 46063043 46063847 ZNF274 GTRD no Cervix (HeLa-S3) 21767289
chr17 46063057 46063748 ZNF143 GTRD no Epithelial (MCF-7) 21767290
chr17 46063076 46063806 ZBTB33 GTRD no Brain (SK-N-SH) 21767291
chr17 46063081 46063703 ZNF274 GTRD no Cervix (HeLa-S3) 21767292
chr17 46063082 46063708 ZBTB33 GTRD no Brain (SK-N-SH) 21767293
chr17 46063107 46063847 ZBTB33 GTRD no Brain (SK-N-SH) 21767294
chr17 46063114 46063659 ZNF143 GTRD no Epithelial (MCF-7) 21767295
chr17 46063118 46063729 ZNF274 GTRD no Cervix (HeLa-S3) 21767296
chr17 46063119 46063679 ZBTB33 GTRD no Brain (SK-N-SH) 21767297
chr17 46063134 46063729 ZBTB33 GTRD no Brain (SK-N-SH) 21767298
chr17 46063144 46063692 ZNF143 GTRD no Epithelial (MCF-7) 21767299
chr17 46063148 46063733 ZNF143 GTRD no Epithelial (MCF-7) 21767300
chr17 46063152 46063779 ZNF274 GTRD no Cervix (HeLa-S3) 21767301
chr17 46063181 46063676 ZNF143 GTRD no Epithelial (MCF-7) 21767302
chr17 46063191 46063682 ZBTB33 GTRD no Brain (SK-N-SH) 21767303
chr17 46063195 46063722 ZNF274 GTRD no Cervix (HeLa-S3) 21767304
chr17 46063199 46063690 ZBTB33 GTRD no Brain (SK-N-SH) 21767305
chr17 46063200 46063653 ZNF143 GTRD no Epithelial (MCF-7) 21767306
chr17 46063215 46063620 ZNF143 GTRD no Epithelial (MCF-7) 21767307
chr17 46063265 46063648 ZNF274 GTRD no Cervix (HeLa-S3) 21767308
chr17 46063289 46063709 ZNF143 GTRD no Epithelial (MCF-7) 21767309
chr17 46063294 46063594 ZNF274 GTRD no Cervix (HeLa-S3) 21767310
chr17 46063298 46063710 ZNF143 GTRD no Epithelial (MCF-7) 21767311
chr17 46063434 46063452 RARA JASPAR yes 54549009
Genes associated with rs559198536[chr17:46063448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More