EnhancerDB
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  3. rs559216900[chr5:173210812]
Enhancers that have rs559216900[chr5:173210812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559216900[chr5:173210812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173210804 173210825 IRF1 JASPAR yes 67904678
chr5 173210804 173210825 ZNF263 JASPAR yes 67904679
chr5 173210808 173210829 IRF1 JASPAR yes 67904680
chr5 173210808 173210829 ZNF263 JASPAR yes 67904681
chr5 173210812 173210833 IRF1 JASPAR yes 67904682
chr5 173210812 173210833 ZNF263 JASPAR yes 67904683
Genes associated with rs559216900[chr5:173210812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More