EnhancerDB
  1. Home
  2. SNP
  3. rs55923278[chr1:226858570]
Enhancers that have rs55923278[chr1:226858570]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55923278[chr1:226858570]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226858553 226858571 MAFF JASPAR yes 35830689
Genes associated with rs55923278[chr1:226858570], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0 Liver 0.496691 1902