EnhancerDB
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  3. rs559243174[chr6:30784120]
Enhancers that have rs559243174[chr6:30784120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559243174[chr6:30784120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30784108 30784123 TFAP2A JASPAR yes 101054214
chr6 30784108 30784123 TFAP2C JASPAR yes 101054215
chr6 30784120 30784127 SP1 TRANSFAC yes 101054216
chr6 30784120 30784130 SP1 JASPAR yes 101054217
Genes associated with rs559243174[chr6:30784120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More