EnhancerDB
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  3. rs559284309[chr5:77890962]
Enhancers that have rs559284309[chr5:77890962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77890894 77891278 vista48162
VISTA
Transcript factors that have rs559284309[chr5:77890962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77890841 77891299 EP300 UCSC Txn Factor no Conserved 108535487
chr5 77890931 77891289 TCF12 UCSC Txn Factor no Conserved 108535488
chr5 77890932 77891012 GATA3 UCSC Txn Factor no Conserved 108535489
chr5 77890946 77891311 JUN UCSC Txn Factor no Conserved 108535490
chr5 77890953 77890967 SPI1 JASPAR yes 63603993
chr5 77890953 77890967 SPI1 JASPAR yes 70669537
chr5 77890955 77890967 EHF JASPAR yes 63603994
chr5 77890955 77890967 ELF4 JASPAR yes 63603995
chr5 77890955 77890967 EHF JASPAR yes 70669538
chr5 77890955 77890967 ELF4 JASPAR yes 70669539
Genes associated with rs559284309[chr5:77890962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More