EnhancerDB
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  3. rs55929512[chr3:58030163]
Enhancers that have rs55929512[chr3:58030163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55929512[chr3:58030163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58030156 58030171 FOXP1 JASPAR yes 2668638
chr3 58030158 58030178 RREB1 JASPAR yes 2668639
chr3 58030160 58030175 FOXP1 JASPAR yes 2668640
chr3 58030161 58030172 FOXA1 JASPAR yes 2668641
chr3 58030161 58030176 FOXA1 JASPAR yes 2668642
chr3 58030162 58030174 FOXC2 JASPAR yes 2668643
chr3 58030162 58030182 RREB1 JASPAR yes 2668644
chr3 58030163 58030175 FOXI1 JASPAR yes 2668645
chr3 58030163 58030183 RREB1 JASPAR yes 2668646
Genes associated with rs55929512[chr3:58030163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More