EnhancerDB
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  3. rs559335963[chr5:148938468]
Enhancers that have rs559335963[chr5:148938468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148937365 148947295 enh8790
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559335963[chr5:148938468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148938459 148938472 POU2F2 JASPAR yes 66823931
chr5 148938460 148938469 POU3F4 JASPAR yes 66823932
chr5 148938460 148938469 POU5F1B JASPAR yes 66823933
chr5 148938465 148938477 POU3F1 JASPAR yes 66823934
chr5 148938465 148938478 POU2F2 JASPAR yes 66823935
chr5 148938466 148938474 FOXL1 JASPAR yes 66823936
chr5 148938466 148938475 POU3F4 JASPAR yes 66823937
chr5 148938466 148938477 FOXB1 JASPAR yes 66823938
Genes associated with rs559335963[chr5:148938468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More