EnhancerDB
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  3. rs55953544[chr15:39417961]
Enhancers that have rs55953544[chr15:39417961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39405340 39429015 enh31301
Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs55953544[chr15:39417961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39417957 39417969 FOXC2 JASPAR yes 22855171
chr15 39417959 39417963 YY1 TRANSFAC yes 22855172
Genes associated with rs55953544[chr15:39417961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More