EnhancerDB
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  3. rs559569969[chr1:203517680]
Enhancers that have rs559569969[chr1:203517680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs559569969[chr1:203517680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203516480 203518181 ZNF274 GTRD no Cervix (HeLa-S3) 21369434
chr1 203516793 203518222 ZNF274 GTRD no Cervix (HeLa-S3) 21369435
chr1 203517280 203517888 ZNF274 GTRD no Cervix (HeLa-S3) 21369437
chr1 203517418 203517888 ZNF274 GTRD no Cervix (HeLa-S3) 21369438
chr1 203517677 203517692 FOXP1 JASPAR yes 34638497
chr1 203517678 203517693 FOXP1 JASPAR yes 34638498
chr1 203517679 203517685 TBP TRANSFAC yes 34638499
chr1 203517679 203517694 FOXP1 JASPAR yes 34638500
chr1 203517680 203517695 FOXP1 JASPAR yes 34638501
chr1 203517680 203517701 IRF1 JASPAR yes 34638502
Genes associated with rs559569969[chr1:203517680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More