EnhancerDB
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  3. rs559611303[chr1:8279609]
Enhancers that have rs559611303[chr1:8279609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559611303[chr1:8279609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8279599 8279609 MEF2A JASPAR yes 26529300
chr1 8279603 8279614 CDX2 JASPAR yes 26529302
chr1 8279604 8279615 HOXA10 JASPAR yes 26529304
chr1 8279605 8279614 CDX1 JASPAR yes 26529305
chr1 8279605 8279615 HOXA13 JASPAR yes 26529306
chr1 8279605 8279615 HOXD13 JASPAR yes 26529307
chr1 8279605 8279620 MEF2C JASPAR yes 26529308
chr1 8279605 8279626 IRF1 JASPAR yes 26529309
chr1 8279606 8279617 PHOX2A JASPAR yes 26529310
chr1 8279606 8279617 PROP1 JASPAR yes 26529311
chr1 8279607 8279619 MEF2A JASPAR yes 26529312
Genes associated with rs559611303[chr1:8279609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More