EnhancerDB
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Enhancers that have rs559643342[chr12:66286134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 66278327 66298619 enh29659
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr12 66285844 66286273 vista13846
VISTA
Transcript factors that have rs559643342[chr12:66286134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66285693 66286369 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042640
chr12 66285752 66286292 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042641
chr12 66285778 66286134 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042644
chr12 66285784 66286180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108042645
chr12 66285785 66286161 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21553389
chr12 66285785 66286161 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108042646
chr12 66285823 66286399 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042648
chr12 66285830 66286170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108042649
chr12 66285835 66286375 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042652
chr12 66285863 66286387 ZNF274 GTRD no Bone Marrow (K562) 108042656
chr12 66285865 66286247 FOSL2 UCSC Txn Factor no Conserved 108042657
chr12 66285865 66286247 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042658
chr12 66285869 66286353 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042659
chr12 66285875 66286471 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21553392
chr12 66285875 66286471 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108042660
chr12 66285915 66286185 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042662
chr12 66286007 66286200 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042663
chr12 66286023 66286582 ZNF274 GTRD no Bone Marrow (K562) 108042664
chr12 66286069 66286333 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042665
chr12 66286124 66286139 ZBTB33 JASPAR yes 82425185
chr12 66286124 66286139 ZBTB33 JASPAR yes 121502637
Genes associated with rs559643342[chr12:66286134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More