EnhancerDB
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  3. rs559719246[chr2:227527267]
Enhancers that have rs559719246[chr2:227527267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559719246[chr2:227527267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227527256 227527269 SMAD2 JASPAR yes 81480551
chr2 227527261 227527273 HES5 JASPAR yes 81480552
chr2 227527261 227527273 HES7 JASPAR yes 81480553
chr2 227527262 227527272 BHLHE40 JASPAR yes 81480554
chr2 227527262 227527272 HEY1 JASPAR yes 81480555
chr2 227527262 227527272 HEY2 JASPAR yes 81480556
chr2 227527262 227527272 MAX JASPAR yes 81480557
chr2 227527262 227527272 MNT JASPAR yes 81480558
chr2 227527262 227527272 TFE3 JASPAR yes 81480559
chr2 227527262 227527272 TFEB JASPAR yes 81480560
chr2 227527264 227527269 MYC TRANSFAC yes 81480561
chr2 227527264 227527269 USF1 TRANSFAC yes 81480562
chr2 227527264 227527269 USF2 TRANSFAC yes 81480563
chr2 227527264 227527271 USF1 JASPAR yes 81480564
Genes associated with rs559719246[chr2:227527267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More