EnhancerDB
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  3. rs55973513[chr6:30798473]
Enhancers that have rs55973513[chr6:30798473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55973513[chr6:30798473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30798463 30798478 FOXP1 JASPAR yes 101056494
chr6 30798466 30798477 FOXP2 JASPAR yes 101056495
chr6 30798470 30798476 HiNF-A TRANSFAC yes 101056496
chr6 30798470 30798480 MAX JASPAR yes 101056497
chr6 30798471 30798481 CLOCK JASPAR yes 101056498
chr6 30798471 30798481 MYF6 JASPAR yes 101056499
chr6 30798471 30798481 NEUROG2 JASPAR yes 101056500
Genes associated with rs55973513[chr6:30798473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More