EnhancerDB
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  3. rs559770454[chr6:30748609]
Enhancers that have rs559770454[chr6:30748609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30748515 30748873 vista51543
VISTA
Transcript factors that have rs559770454[chr6:30748609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30748607 30748628 IRF1 JASPAR yes 70344577
chr6 30748607 30748628 IRF1 JASPAR yes 101048465
chr6 30748609 30748612 MYB TRANSFAC yes 70344578
chr6 30748609 30748612 MYB TRANSFAC yes 101048466
chr6 30748609 30748624 STAT2 JASPAR yes 70344579
chr6 30748609 30748624 STAT2 JASPAR yes 101048467
Genes associated with rs559770454[chr6:30748609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More