EnhancerDB
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  3. rs55978979[chr1:181084058]
Enhancers that have rs55978979[chr1:181084058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55978979[chr1:181084058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181083509 181085142 ZNF143 GTRD no Epithelial (MCF-7) 21354749
chr1 181083610 181084939 ZNF143 GTRD no Epithelial (MCF-7) 21354750
chr1 181083696 181084086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354751
chr1 181083715 181085389 ZNF274 GTRD no Bone Marrow (K562) 21354752
chr1 181083752 181085029 ZNF143 GTRD no Epithelial (MCF-7) 21354754
chr1 181083770 181085035 ZNF274 GTRD no Bone Marrow (K562) 21354755
chr1 181083786 181084948 ZNF143 GTRD no Epithelial (MCF-7) 21354756
chr1 181083794 181085151 ZNF274 GTRD no Bone Marrow (K562) 21354757
chr1 181083829 181084771 ZNF143 GTRD no Epithelial (MCF-7) 21354758
chr1 181083832 181084711 ZNF274 GTRD no Cervix (HeLa-S3) 21354759
chr1 181083853 181084907 ZNF274 GTRD no Bone Marrow (K562) 21354760
chr1 181083859 181085317 ZNF274 GTRD no Bone Marrow (K562) 21354761
chr1 181083869 181085099 ZNF274 GTRD no Bone Marrow (K562) 21354762
chr1 181083876 181084592 ZNF274 GTRD no Cervix (HeLa-S3) 21354763
chr1 181083876 181084848 ZNF143 GTRD no Epithelial (MCF-7) 21354764
chr1 181083895 181084682 ZNF274 GTRD no Bone Marrow (K562) 21354765
chr1 181083896 181085020 ZNF274 GTRD no Bone Marrow (K562) 21354766
chr1 181083899 181084248 ZNF274 GTRD no Liver (HepG2) 21354767
chr1 181083905 181084229 ZNF274 GTRD no Liver (HepG2) 21354768
chr1 181083908 181084715 ZNF143 GTRD no Epithelial (MCF-7) 21354769
chr1 181083908 181084770 ZNF143 GTRD no Epithelial (MCF-7) 21354770
chr1 181083917 181085020 ZNF274 GTRD no Bone Marrow (K562) 21354771
chr1 181083934 181084928 ZNF274 GTRD no Bone Marrow (K562) 21354772
chr1 181083941 181084856 ZNF143 GTRD no Epithelial (MCF-7) 21354773
chr1 181083955 181084836 ZNF274 GTRD no Blood (GM12878) 21354774
chr1 181083961 181084829 ZNF143 GTRD no Epithelial (MCF-7) 21354775
chr1 181083968 181084818 ZNF274 GTRD no Blood (GM12878) 21354776
chr1 181083968 181084855 ZNF274 GTRD no Blood (GM12878) 21354777
chr1 181083968 181085024 ZNF274 GTRD no Bone Marrow (K562) 21354778
chr1 181083970 181085084 ZNF274 GTRD no Bone Marrow (K562) 21354779
chr1 181083971 181084559 ZNF143 GTRD no Epithelial (MCF-7) 21354780
chr1 181083973 181084990 ZNF274 GTRD no Cervix (HeLa-S3) 21354781
chr1 181083977 181084873 ZNF143 GTRD no Epithelial (MCF-7) 21354782
chr1 181083977 181084892 ZNF274 GTRD no Bone Marrow (K562) 21354783
chr1 181083982 181084732 ZNF143 GTRD no Epithelial (MCF-7) 21354784
chr1 181083984 181084907 ZNF274 GTRD no Bone Marrow (K562) 21354785
chr1 181083993 181084676 ZNF274 GTRD no Liver (HepG2) 21354786
chr1 181083994 181084761 ZNF143 GTRD no Epithelial (MCF-7) 21354787
chr1 181083997 181084613 ZNF274 GTRD no Liver (HepG2) 21354788
chr1 181083997 181084859 ZNF143 GTRD no Epithelial (MCF-7) 21354789
chr1 181083999 181084821 ZNF274 GTRD no Bone Marrow (K562) 21354790
chr1 181084001 181084878 ZNF274 GTRD no Blood (GM12878) 21354791
chr1 181084002 181084871 ZNF143 GTRD no Epithelial (MCF-7) 21354792
chr1 181084004 181084629 ZNF143 GTRD no Epithelial (MCF-7) 21354793
chr1 181084007 181084608 ZNF274 GTRD no Liver (HepG2) 21354794
chr1 181084011 181084496 ZNF274 GTRD no Bone Marrow (K562) 21354795
chr1 181084017 181084498 ZNF143 GTRD no Epithelial (MCF-7) 21354796
chr1 181084021 181084659 ZNF143 GTRD no Epithelial (MCF-7) 21354797
chr1 181084023 181084656 ZNF143 GTRD no Epithelial (MCF-7) 21354798
chr1 181084024 181084642 ZNF274 GTRD no Cervix (HeLa-S3) 21354799
chr1 181084031 181084838 ZNF143 GTRD no Epithelial (MCF-7) 21354800
chr1 181084036 181084929 ZNF143 GTRD no Epithelial (MCF-7) 21354801
chr1 181084039 181085060 ZNF274 GTRD no Bone Marrow (K562) 21354802
chr1 181084045 181084738 ZNF274 GTRD no Blood (GM12878) 21354803
Genes associated with rs55978979[chr1:181084058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More