EnhancerDB
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  3. rs559797476[chr2:238526338]
Enhancers that have rs559797476[chr2:238526338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238519874 238529599 enh19399
Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr2 238522379 238526567 vista1020
VISTA
Transcript factors that have rs559797476[chr2:238526338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238526326 238526340 SPI1 JASPAR yes 68303437
chr2 238526326 238526340 SPI1 JASPAR yes 82124962
chr2 238526328 238526349 ZNF263 JASPAR yes 68303438
chr2 238526328 238526349 ZNF263 JASPAR yes 82124963
chr2 238526331 238526341 SP1 JASPAR yes 68303439
chr2 238526331 238526341 SP1 JASPAR yes 82124964
chr2 238526331 238526352 ZNF263 JASPAR yes 68303440
chr2 238526331 238526352 ZNF263 JASPAR yes 82124965
chr2 238526338 238526342 LFA1 TRANSFAC yes 68303441
chr2 238526338 238526342 LFA1 TRANSFAC yes 82124966
Genes associated with rs559797476[chr2:238526338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More