EnhancerDB
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  3. rs559801386[chr12:120668910]
Enhancers that have rs559801386[chr12:120668910]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559801386[chr12:120668910]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063015
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063016
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063017
chr12 120667969 120671313 ZNF274 GTRD no Blood (GM12878) 108063073
chr12 120667969 120671313 ZNF274 GTRD no Blood (GM12878) 108063074
chr12 120668267 120671736 ZNF274 GTRD no Blood (GM12878) 108063082
chr12 120668267 120671736 ZNF274 GTRD no Blood (GM12878) 108063083
chr12 120668349 120671361 ZNF274 GTRD no Blood (GM12878) 108063106
chr12 120668349 120671361 ZNF274 GTRD no Blood (GM12878) 108063107
chr12 120668366 120669022 ZNF274 GTRD no Cervix (HeLa-S3) 21578385
chr12 120668366 120669022 ZNF274 GTRD no Cervix (HeLa-S3) 108063116
chr12 120668406 120669229 SOX2 GTRD no Neural Stem Cells (H9) 21578415
chr12 120668406 120669229 SOX2 GTRD no Neural Stem Cells (H9) 108063152
chr12 120668406 120669229 SOX2 GTRD no Neural Stem Cells (H9) 108063153
chr12 120668453 120669307 ZNF143 GTRD no Epithelial (MCF-7) 21578428
chr12 120668453 120669307 ZNF143 GTRD no Epithelial (MCF-7) 108063166
chr12 120668453 120669307 ZNF143 GTRD no Epithelial (MCF-7) 108063167
chr12 120668471 120669145 ZNF274 GTRD no Blood (GM12878) 108063172
chr12 120668471 120669145 ZNF274 GTRD no Blood (GM12878) 108063173
chr12 120668615 120671246 ZNF274 GTRD no Blood (GM12878) 108063177
chr12 120668615 120671246 ZNF274 GTRD no Blood (GM12878) 108063178
chr12 120668667 120669118 ZNF274 GTRD no Blood (GM12878) 108063179
chr12 120668667 120669118 ZNF274 GTRD no Blood (GM12878) 108063180
chr12 120668892 120668912 ESR1 JASPAR yes 124156660
chr12 120668895 120669932 ZNF274 GTRD no Blood (GM12878) 108063181
Genes associated with rs559801386[chr12:120668910], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More