EnhancerDB
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  3. rs559875148[chr11:65189993]
Enhancers that have rs559875148[chr11:65189993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559875148[chr11:65189993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977988
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977989
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977990
chr11 65189733 65190563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21492110
chr11 65189777 65190038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21492112
chr11 65189793 65190313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492113
chr11 65189813 65190217 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492114
chr11 65189827 65189997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21492115
chr11 65189878 65196484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492117
chr11 65189890 65190500 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21492118
chr11 65189948 65190424 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492119
chr11 65189948 65196395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492120
chr11 65189982 65189995 ELF3 JASPAR yes 39314273
chr11 65189983 65189994 SPDEF JASPAR yes 39314274
chr11 65189983 65189995 ELF1 JASPAR yes 39314275
chr11 65189984 65189993 ELK4 JASPAR yes 39314276
chr11 65189985 65189996 STAT3 JASPAR yes 39314277
chr11 65189990 65189995 ETS2 TRANSFAC yes 39314278
chr11 65189992 65190512 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21492121
chr11 65189993 65190529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492122
Genes associated with rs559875148[chr11:65189993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More