EnhancerDB
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  3. rs559882612[chr11:65212969]
Enhancers that have rs559882612[chr11:65212969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559882612[chr11:65212969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65210875 65214679 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492936
chr11 65210986 65213025 TCF7L2 GTRD no Colon (HCT116) 21492947
chr11 65211731 65214631 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21492952
chr11 65211759 65214686 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21492953
chr11 65211841 65213039 ZNF274 GTRD no Bone Marrow (K562) 21492955
chr11 65211950 65213213 ZNF274 GTRD no Bone Marrow (K562) 21492959
chr11 65211993 65213038 ZNF274 GTRD no Blood (GM12878) 21492960
chr11 65212201 65213045 ZNF274 GTRD no Blood (GM12878) 21492968
chr11 65212207 65213147 ZNF274 GTRD no Bone Marrow (K562) 21492969
chr11 65212321 65215137 ZNF274 GTRD no Blood (GM12878) 21492970
chr11 65212335 65213015 ZNF274 GTRD no Blood (GM12878) 21492972
chr11 65212456 65213086 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492973
chr11 65212953 65212971 IRF2 JASPAR yes 39317837
chr11 65212954 65212975 IRF1 JASPAR yes 39317838
chr11 65212956 65212971 STAT2 JASPAR yes 39317839
chr11 65212958 65212970 IRF1 JASPAR yes 39317840
chr11 65212960 65212978 IRF2 JASPAR yes 39317841
Genes associated with rs559882612[chr11:65212969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More