EnhancerDB
  1. Home
  2. SNP
  3. rs559892052[chr1:27873370]
Enhancers that have rs559892052[chr1:27873370]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs559892052[chr1:27873370]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27873366 27873375 ZEB1 JASPAR yes 27707939
chr1 27873369 27873374 USF2 TRANSFAC yes 27707940
Genes associated with rs559892052[chr1:27873370], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More