EnhancerDB
  1. Home
  2. SNP
  3. rs559928849[chr16:89519483]
Enhancers that have rs559928849[chr16:89519483]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559928849[chr16:89519483]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89519480 89519490 SP1 JASPAR yes 12346424
chr16 89519480 89519499 PAX5 JASPAR yes 12346425
chr16 89519483 89519488 SP1 TRANSFAC yes 12346426
Genes associated with rs559928849[chr16:89519483], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More