EnhancerDB
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  3. rs559967382[chr1:173369904]
Enhancers that have rs559967382[chr1:173369904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs559967382[chr1:173369904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173369825 173370180 SOX2 GTRD no Neural Stem Cells (H9) 21351236
chr1 173369891 173369905 RORA JASPAR yes 33195102
chr1 173369892 173369905 DUXA JASPAR yes 33195103
chr1 173369893 173369904 DUX4 JASPAR yes 33195104
chr1 173369903 173369913 NFATC3 JASPAR yes 33195106
Genes associated with rs559967382[chr1:173369904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More