EnhancerDB
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  3. rs560003227[chr17:78639200]
Enhancers that have rs560003227[chr17:78639200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560003227[chr17:78639200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78639180 78639201 ZNF263 JASPAR yes 56264858
chr17 78639182 78639203 IRF1 JASPAR yes 56264859
chr17 78639185 78639206 ZNF263 JASPAR yes 56264863
chr17 78639187 78639208 IRF1 JASPAR yes 56264864
chr17 78639189 78639204 PRDM1 JASPAR yes 56264866
chr17 78639189 78639204 STAT2 JASPAR yes 56264867
chr17 78639190 78639211 ZNF263 JASPAR yes 56264868
chr17 78639192 78639213 IRF1 JASPAR yes 56264869
chr17 78639194 78639209 PRDM1 JASPAR yes 56264871
chr17 78639194 78639209 STAT2 JASPAR yes 56264872
chr17 78639195 78639216 ZNF263 JASPAR yes 56264873
chr17 78639197 78639218 IRF1 JASPAR yes 56264874
chr17 78639199 78639204 ETS2 TRANSFAC yes 56264875
chr17 78639199 78639214 PRDM1 JASPAR yes 56264876
chr17 78639199 78639214 STAT2 JASPAR yes 56264877
chr17 78639200 78639221 ZNF263 JASPAR yes 56264878
Genes associated with rs560003227[chr17:78639200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More