EnhancerDB
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  3. rs560006485[chr17:41493321]
Enhancers that have rs560006485[chr17:41493321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560006485[chr17:41493321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41492716 41493395 ZNF274 GTRD no Liver (HepG2) 21760157
chr17 41492720 41493421 ZBTB33 GTRD no Brain (SK-N-SH) 21760158
chr17 41492760 41493354 ZNF274 GTRD no Liver (HepG2) 21760159
chr17 41492770 41493714 AR GTRD no Prostate (PC-3) 21760161
chr17 41493308 41493323 MEF2C JASPAR yes 54344361
chr17 41493309 41493324 MEF2A JASPAR yes 54344362
chr17 41493310 41493322 MEF2A JASPAR yes 54344363
chr17 41493310 41493322 MEF2B JASPAR yes 54344364
chr17 41493310 41493322 MEF2D JASPAR yes 54344365
Genes associated with rs560006485[chr17:41493321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More