EnhancerDB
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  3. rs56001016[chr12:109077235]
Enhancers that have rs56001016[chr12:109077235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56001016[chr12:109077235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109077226 109077236 NFATC3 JASPAR yes 123612018
chr12 109077228 109077235 NFATC2 JASPAR yes 123612019
chr12 109077231 109077243 FOXC2 JASPAR yes 123612020
chr12 109077233 109077247 ONECUT2 JASPAR yes 123612021
chr12 109077233 109077247 ONECUT3 JASPAR yes 123612022
chr12 109077233 109077248 HNF1A JASPAR yes 123612023
chr12 109077234 109077249 FOXA1 JASPAR yes 123612024
chr12 109077235 109077246 FOXB1 JASPAR yes 123612025
chr12 109077235 109077246 FOXC1 JASPAR yes 123612026
chr12 109077235 109077247 FOXC2 JASPAR yes 123612027
Genes associated with rs56001016[chr12:109077235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More