EnhancerDB
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  3. rs560058419[chr2:240177103]
Enhancers that have rs560058419[chr2:240177103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560058419[chr2:240177103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240177087 240177108 IRF1 JASPAR yes 82221826
chr2 240177090 240177104 SPI1 JASPAR yes 82221828
chr2 240177090 240177104 SPIC JASPAR yes 82221829
chr2 240177101 240177106 ETS2 TRANSFAC yes 82221830
Genes associated with rs560058419[chr2:240177103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More