EnhancerDB
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  3. rs560177541[chr16:85245340]
Enhancers that have rs560177541[chr16:85245340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560177541[chr16:85245340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85244946 85246411 ZNF274 GTRD no Bone Marrow (K562) 21721211
chr16 85245005 85246460 ZNF274 GTRD no Cervix (HeLa-S3) 21721212
chr16 85245098 85246248 ZNF274 GTRD no Blood (GM12878) 21721213
chr16 85245103 85246491 ZNF143 GTRD no Epithelial (MCF-7) 21721214
chr16 85245108 85246307 ZNF274 GTRD no Bone Marrow (K562) 21721215
chr16 85245124 85246453 ZNF143 GTRD no Epithelial (MCF-7) 21721216
chr16 85245134 85246430 ZNF274 GTRD no Blood (GM12878) 21721217
chr16 85245138 85246103 ZNF274 GTRD no Bone Marrow (K562) 21721218
chr16 85245155 85246844 ZNF274 GTRD no Bone Marrow (K562) 21721219
chr16 85245160 85246254 ZNF274 GTRD no Blood (GM12878) 21721220
chr16 85245169 85246294 ZNF274 GTRD no Blood (GM12878) 21721221
chr16 85245178 85247005 ZNF274 GTRD no Bone Marrow (K562) 21721222
chr16 85245179 85246321 ZNF274 GTRD no Cervix (HeLa-S3) 21721223
chr16 85245179 85246330 ZNF274 GTRD no Liver (HepG2) 21721224
chr16 85245183 85246450 ZNF143 GTRD no Epithelial (MCF-7) 21721225
chr16 85245196 85246444 ZNF143 GTRD no Epithelial (MCF-7) 21721226
chr16 85245209 85246336 ZNF143 GTRD no Epithelial (MCF-7) 21721227
chr16 85245211 85246248 TCF7L2 GTRD no Colon (HCT116) 21721228
chr16 85245222 85246164 ZNF274 GTRD no Bone Marrow (K562) 21721229
chr16 85245231 85245577 ZNF143 GTRD no Epithelial (MCF-7) 21721230
chr16 85245236 85246305 ZNF274 GTRD no Bone Marrow (K562) 21721231
chr16 85245237 85246367 ZNF274 GTRD no Blood (GM12878) 21721232
chr16 85245248 85246549 ZNF143 GTRD no Epithelial (MCF-7) 21721233
chr16 85245251 85245607 ZNF143 GTRD no Epithelial (MCF-7) 21721234
chr16 85245257 85246242 ZNF274 GTRD no Bone Marrow (K562) 21721235
chr16 85245258 85245565 ZNF143 GTRD no Epithelial (MCF-7) 21721236
chr16 85245258 85246258 ZNF274 GTRD no Liver (HepG2) 21721237
chr16 85245260 85246159 ZNF274 GTRD no Blood (GM12878) 21721238
chr16 85245263 85245865 ZNF274 GTRD no Bone Marrow (K562) 21721239
chr16 85245266 85246324 ZNF274 GTRD no Bone Marrow (K562) 21721240
chr16 85245266 85246345 ZNF274 GTRD no Bone Marrow (K562) 21721241
chr16 85245268 85245599 ZNF274 GTRD no Liver (HepG2) 21721242
chr16 85245291 85246326 ZNF274 GTRD no Liver (HepG2) 21721243
chr16 85245295 85245625 ZNF274 GTRD no Bone Marrow (K562) 21721244
chr16 85245329 85246235 ZNF274 GTRD no Liver (HepG2) 21721245
chr16 85245338 85245347 HIC2 JASPAR yes 12033261
chr16 85245339 85246259 ZNF274 GTRD no Bone Marrow (K562) 21721246
chr16 85245340 85245351 NRF1 JASPAR yes 12033262
Genes associated with rs560177541[chr16:85245340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More