EnhancerDB
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  3. rs560197237[chr17:80508536]
Enhancers that have rs560197237[chr17:80508536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560197237[chr17:80508536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80508313 80509153 TCF7L2 GTRD no Colon (HCT116) 21800733
chr17 80508313 80509153 TCF7L2 GTRD no Colon (HCT116) 108312689
chr17 80508530 80508540 SP1 JASPAR yes 56373666
chr17 80508530 80508549 PAX5 JASPAR yes 56373667
chr17 80508533 80508538 SP1 TRANSFAC yes 56373668
Genes associated with rs560197237[chr17:80508536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More