EnhancerDB
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  3. rs560199756[chr1:1789344]
Enhancers that have rs560199756[chr1:1789344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560199756[chr1:1789344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1789333 1789350 ZNF410 JASPAR yes 26207765
chr1 1789340 1789351 HOXA10 JASPAR yes 26207766
chr1 1789341 1789350 CDX1 JASPAR yes 26207767
chr1 1789341 1789351 HOXA13 JASPAR yes 26207768
chr1 1789341 1789351 HOXD13 JASPAR yes 26207769
Genes associated with rs560199756[chr1:1789344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More