EnhancerDB
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  3. rs560224940[chr6:11218578]
Enhancers that have rs560224940[chr6:11218578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560224940[chr6:11218578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11218572 11218593 IRF1 JASPAR yes 99865659
chr6 11218574 11218589 PRDM1 JASPAR yes 99865660
chr6 11218574 11218589 STAT2 JASPAR yes 99865661
chr6 11218576 11218597 IRF1 JASPAR yes 99865662
chr6 11218577 11218592 FOXP1 JASPAR yes 99865663
chr6 11218578 11218593 FOXP1 JASPAR yes 99865664
chr6 11218578 11218599 IRF1 JASPAR yes 99865665
Genes associated with rs560224940[chr6:11218578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More