EnhancerDB
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  3. rs560228377[chr19:10999332]
Enhancers that have rs560228377[chr19:10999332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10999263 10999360 vista28613
VISTA
Transcript factors that have rs560228377[chr19:10999332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10998942 10999438 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21849158
chr19 10998942 10999438 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108384241
chr19 10999185 10999621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849159
chr19 10999185 10999621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384242
chr19 10999254 10999514 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849160
chr19 10999254 10999514 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384243
chr19 10999258 10999514 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849161
chr19 10999258 10999514 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384244
chr19 10999287 10999611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849162
chr19 10999287 10999611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384245
chr19 10999303 10999623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849163
chr19 10999303 10999623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384246
chr19 10999311 10999332 ZNF263 JASPAR yes 70803583
chr19 10999311 10999332 ZNF263 JASPAR yes 112443584
chr19 10999317 10999337 RREB1 JASPAR yes 70803585
chr19 10999317 10999337 RREB1 JASPAR yes 112443586
chr19 10999320 10999336 GLIS1 JASPAR yes 70803586
chr19 10999320 10999336 GLIS1 JASPAR yes 112443587
chr19 10999321 10999335 GLIS3 JASPAR yes 70803587
chr19 10999321 10999335 GLIS3 JASPAR yes 112443588
chr19 10999323 10999344 ZNF263 JASPAR yes 70803588
chr19 10999323 10999344 ZNF263 JASPAR yes 112443589
Genes associated with rs560228377[chr19:10999332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More