EnhancerDB
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  3. rs56023962[chr17:25681130]
Enhancers that have rs56023962[chr17:25681130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56023962[chr17:25681130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245255
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245256
chr17 25680528 25681188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747674
chr17 25680528 25681188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245276
chr17 25680540 25681140 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245279
chr17 25680630 25681300 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245307
chr17 25680711 25681147 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245358
chr17 25680712 25681148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245360
chr17 25680713 25681170 MAZ UCSC Txn Factor no Conserved 108245362
chr17 25680734 25681170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245376
chr17 25680735 25681175 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21747722
chr17 25680735 25681175 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108245377
chr17 25680782 25681991 CTCF UCSC Txn Factor no Conserved 108245395
chr17 25680796 25681236 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747736
chr17 25680796 25681236 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245397
chr17 25680807 25681143 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21747738
chr17 25680807 25681143 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108245401
chr17 25680835 25681331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747741
chr17 25680835 25681331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245409
chr17 25680842 25681144 RAD21 UCSC Txn Factor no Conserved 108245410
chr17 25680914 25681159 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747747
chr17 25680914 25681159 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245424
chr17 25681063 25681284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747752
chr17 25681063 25681284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245430
Genes associated with rs56023962[chr17:25681130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More