EnhancerDB
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  3. rs560259071[chr17:78619995]
Enhancers that have rs560259071[chr17:78619995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560259071[chr17:78619995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78619985 78620000 FOXA1 JASPAR yes 56262105
chr17 78619987 78619999 FOXC2 JASPAR yes 56262106
chr17 78619988 78619999 FOXB1 JASPAR yes 56262107
chr17 78619988 78619999 FOXC1 JASPAR yes 56262108
chr17 78619989 78620000 FOXA1 JASPAR yes 56262110
Genes associated with rs560259071[chr17:78619995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More