EnhancerDB
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  3. rs560284860[chr1:44025527]
Enhancers that have rs560284860[chr1:44025527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560284860[chr1:44025527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44025523 44025538 ZIC3 JASPAR yes 28506059
chr1 44025524 44025538 ZIC1 JASPAR yes 28506060
chr1 44025527 44025536 SNAI2 JASPAR yes 28506061
chr1 44025527 44025537 FIGLA JASPAR yes 28506062
chr1 44025527 44025537 MSC JASPAR yes 28506063
chr1 44025527 44025537 TCF3 JASPAR yes 28506064
Genes associated with rs560284860[chr1:44025527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More