EnhancerDB
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  3. rs560304386[chr1:182056681]
Enhancers that have rs560304386[chr1:182056681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 182056560 182056703 vista4118
VISTA
Transcript factors that have rs560304386[chr1:182056681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 21356902
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 107849827
chr1 182056145 182057480 TCF7L2 GTRD no Colon (HCT116) 107849828
chr1 182056195 182057406 ZNF274 GTRD no Blood (GM12878) 107849829
chr1 182056213 182056763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21356903
chr1 182056213 182056763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107849830
chr1 182056270 182057000 TCF7L2 GTRD no Colon (HCT116) 107849831
chr1 182056430 182057127 ZNF274 GTRD no Bone Marrow (K562) 21356904
chr1 182056430 182057127 ZNF274 GTRD no Bone Marrow (K562) 107849832
chr1 182056449 182056964 TCF7L2 GTRD no Colon (HCT116) 107849833
chr1 182056495 182057076 ZNF274 GTRD no Bone Marrow (K562) 21356905
chr1 182056495 182057076 ZNF274 GTRD no Bone Marrow (K562) 107849834
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 21356906
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 107849835
chr1 182056568 182057065 ZNF274 GTRD no Bone Marrow (K562) 21356907
chr1 182056568 182057065 ZNF274 GTRD no Bone Marrow (K562) 107849836
chr1 182056569 182056840 ZNF274 GTRD no Blood (GM12878) 107849837
chr1 182056605 182057014 ZNF274 GTRD no Bone Marrow (K562) 21356908
chr1 182056605 182057014 ZNF274 GTRD no Bone Marrow (K562) 107849838
chr1 182056649 182056934 ZNF274 GTRD no Bone Marrow (K562) 21356909
chr1 182056649 182056934 ZNF274 GTRD no Bone Marrow (K562) 107849839
chr1 182056658 182056946 ZNF274 GTRD no Bone Marrow (K562) 21356910
chr1 182056658 182056946 ZNF274 GTRD no Bone Marrow (K562) 107849840
chr1 182056668 182056949 ZNF274 GTRD no Bone Marrow (K562) 21356911
chr1 182056668 182056949 ZNF274 GTRD no Bone Marrow (K562) 107849841
chr1 182056674 182056685 GCM1 JASPAR yes 33588625
chr1 182056674 182056685 GCM1 JASPAR yes 118409487
Genes associated with rs560304386[chr1:182056681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More