EnhancerDB
  1. Home
  2. SNP
  3. rs560309166[chr1:1775265]
Enhancers that have rs560309166[chr1:1775265]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560309166[chr1:1775265]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1775258 1775272 PLAG1 JASPAR yes 26205771
chr1 1775265 1775270 SP1 TRANSFAC yes 26205772
Genes associated with rs560309166[chr1:1775265], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More